Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LRRTM4Q86VH4 THAP12P3-201ENST00000456373 2266 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AL593856.1-201ENST00000419949 805 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 OR7E117P-201ENST00000422682 1112 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 RPL5P6-201ENST00000425640 886 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 BX119904.3-201ENST00000428194 957 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 DNAJA1P6-201ENST00000437347 354 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 PMS2P11-201ENST00000451831 574 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC234771.3-201ENST00000454984 622 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC090589.1-201ENST00000473109 362 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AL928654.1-201ENST00000476081 354 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 SNORD116-30-201ENST00000516468 85 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 ATP5J2P4-201ENST00000538774 267 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 RPS7P1-201ENST00000571702 585 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC024614.1-201ENST00000577546 307 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 CR382285.1-202ENST00000604687 547 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC097641.3-201ENST00000613523 464 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC007204.1-201ENST00000621794 555 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC119674.1-201ENST00000641611 1210 ntBASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.22□□□□□ -1.25
LRRTM4Q86VH4 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.21□□□□□ -1.25
LRRTM4Q86VH4 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 LARP1P1-201ENST00000407692 292 ntBASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 OR5P4P-201ENST00000424698 917 ntBASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 AC079781.1-201ENST00000441505 394 ntBASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 AL583856.1-201ENST00000454078 1101 ntBASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 AC096922.1-201ENST00000461635 651 ntBASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 AC010409.2-201ENST00000505780 478 ntBASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 BMS1P15-201ENST00000554269 1141 ntBASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.21□□□□□ -1.26
LRRTM4Q86VH4 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms