Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 IGLJCOR18-201ENST00000584002 424 ntBASIC8.62□□□□□ -1.03
PDS5AQ29RF7 AC005899.6-201ENST00000620729 297 ntBASIC8.62□□□□□ -1.03
PDS5AQ29RF7 AC140479.4-205ENST00000636339 820 ntBASIC8.62□□□□□ -1.03
PDS5AQ29RF7 TMEM14EP-202ENST00000639378 1296 ntBASIC8.62□□□□□ -1.03
PDS5AQ29RF7 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 AC131649.2-201ENST00000624925 4439 ntBASIC8.62□□□□□ -1.03
PDS5AQ29RF7 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 AC018688.1-201ENST00000636528 1754 ntBASIC8.62□□□□□ -1.03
PDS5AQ29RF7 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
PDS5AQ29RF7 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 MIR187-201ENST00000385062 109 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AL354794.2-201ENST00000424795 1248 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AC146944.3-201ENST00000509969 371 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 SCARNA6-201ENST00000515982 265 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 SCARNA11.1-201ENST00000516918 132 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AC093283.1-201ENST00000565306 1075 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AC063962.1-201ENST00000608199 521 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AC007671.1-201ENST00000616957 830 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 AL358913.2-201ENST00000553881 1548 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 HSPD1P1-201ENST00000503199 1726 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 Z99129.4-201ENST00000624649 2435 ntBASIC8.61□□□□□ -1.03
PDS5AQ29RF7 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDS5AQ29RF7 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 OR52N3P-201ENST00000413417 934 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 RPS10P14-201ENST00000440748 502 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 OR51P1P-201ENST00000447547 942 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 RN7SL160P-201ENST00000468558 284 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 GLRXP3-201ENST00000470810 321 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AC079866.1-201ENST00000534985 1220 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AL132640.1-201ENST00000559594 619 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AC096708.2-201ENST00000577676 512 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AL139317.4-201ENST00000605879 760 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 AC079777.1-201ENST00000623836 1953 ntBASIC8.6□□□□□ -1.03
PDS5AQ29RF7 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDS5AQ29RF7 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms