Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 MIR8089-201ENST00000620165 82 ntBASIC7.66□□□□□ -1.18
APOEP02649 AC022743.1-201ENST00000624990 664 ntBASIC7.66□□□□□ -1.18
APOEP02649 AC073488.7-201ENST00000633785 778 ntBASIC7.66□□□□□ -1.18
APOEP02649 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
APOEP02649 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 AC107980.1-201ENST00000558671 3355 ntBASIC7.66□□□□□ -1.18
APOEP02649 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.66□□□□□ -1.18
APOEP02649 AC241584.2-201ENST00000637142 2090 ntBASIC7.66□□□□□ -1.18
APOEP02649 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
APOEP02649 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 AL157713.1-201ENST00000379752 1531 ntBASIC7.65□□□□□ -1.18
APOEP02649 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
APOEP02649 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.65□□□□□ -1.18
APOEP02649 CLIC4P3-201ENST00000422221 752 ntBASIC7.65□□□□□ -1.18
APOEP02649 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC7.65□□□□□ -1.18
APOEP02649 VDAC2P3-201ENST00000430995 828 ntBASIC7.65□□□□□ -1.18
APOEP02649 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.65□□□□□ -1.18
APOEP02649 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.65□□□□□ -1.18
APOEP02649 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 AL136981.1-203ENST00000451452 3844 ntBASIC7.65□□□□□ -1.18
APOEP02649 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.65□□□□□ -1.18
APOEP02649 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.65□□□□□ -1.18
APOEP02649 MRPL49P1-201ENST00000505951 535 ntBASIC7.65□□□□□ -1.18
APOEP02649 AC008496.1-201ENST00000509131 295 ntBASIC7.65□□□□□ -1.18
APOEP02649 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.65□□□□□ -1.18
APOEP02649 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC7.65□□□□□ -1.18
APOEP02649 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.65□□□□□ -1.18
APOEP02649 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.65□□□□□ -1.18
APOEP02649 FRG2IP-201ENST00000563581 781 ntBASIC7.65□□□□□ -1.18
APOEP02649 AC093283.1-201ENST00000565306 1075 ntBASIC7.65□□□□□ -1.18
APOEP02649 AC007923.2-201ENST00000584218 1591 ntBASIC7.65□□□□□ -1.18
APOEP02649 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.65□□□□□ -1.18
APOEP02649 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.65□□□□□ -1.18
APOEP02649 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.65□□□□□ -1.18
APOEP02649 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC7.65□□□□□ -1.18
APOEP02649 AC097376.1-201ENST00000602907 997 ntBASIC7.65□□□□□ -1.18
APOEP02649 RN7SL778P-201ENST00000607160 297 ntBASIC7.65□□□□□ -1.18
APOEP02649 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.65□□□□□ -1.18
APOEP02649 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.65□□□□□ -1.18
APOEP02649 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
APOEP02649 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.65□□□□□ -1.18
APOEP02649 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
APOEP02649 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
APOEP02649 AC116631.1-202ENST00000640984 683 ntBASIC7.65□□□□□ -1.18
APOEP02649 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
APOEP02649 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.65□□□□□ -1.19
APOEP02649 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC7.65□□□□□ -1.19
APOEP02649 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
APOEP02649 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
APOEP02649 AC104162.1-201ENST00000430831 2382 ntBASIC7.64□□□□□ -1.19
APOEP02649 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
APOEP02649 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 AC091544.5-201ENST00000620192 3815 ntBASIC7.64□□□□□ -1.19
APOEP02649 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.64□□□□□ -1.19
APOEP02649 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.64□□□□□ -1.19
APOEP02649 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.64□□□□□ -1.19
APOEP02649 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 RN7SKP174-201ENST00000363803 330 ntBASIC7.64□□□□□ -1.19
APOEP02649 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.64□□□□□ -1.19
APOEP02649 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.64□□□□□ -1.19
APOEP02649 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
APOEP02649 GRPEL2P2-201ENST00000421856 670 ntBASIC7.64□□□□□ -1.19
APOEP02649 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.64□□□□□ -1.19
APOEP02649 AF274573.1-201ENST00000430535 494 ntBASIC7.64□□□□□ -1.19
APOEP02649 NIP7P1-201ENST00000433227 512 ntBASIC7.64□□□□□ -1.19
APOEP02649 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.64□□□□□ -1.19
APOEP02649 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.64□□□□□ -1.19
APOEP02649 AC008620.1-201ENST00000468453 592 ntBASIC7.64□□□□□ -1.19
APOEP02649 AC040975.1-201ENST00000472104 316 ntBASIC7.64□□□□□ -1.19
APOEP02649 AC120057.1-201ENST00000483947 663 ntBASIC7.64□□□□□ -1.19
APOEP02649 RN7SL152P-201ENST00000484176 298 ntBASIC7.64□□□□□ -1.19
APOEP02649 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.64□□□□□ -1.19
APOEP02649 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7.64□□□□□ -1.19
APOEP02649 AC018523.1-201ENST00000534211 512 ntBASIC7.64□□□□□ -1.19
APOEP02649 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms