Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 NACA-216ENST00000550952 2922 ntTSL 2 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 OR5M2P-202ENST00000641241 4242 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 TRIM51HP-202ENST00000530412 1823 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 RN7SKP36-201ENST00000363997 312 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 RNA5SP302-201ENST00000364896 100 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 U3.14-201ENST00000365363 227 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 RNA5SP238-201ENST00000365464 120 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 MIR138-2-201ENST00000384916 84 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AL390840.1-201ENST00000420303 988 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AL359633.1-201ENST00000421403 310 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 EEF1GP7-201ENST00000422983 703 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 CYP4F34P-201ENST00000425951 481 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 DNAJA1P6-201ENST00000437347 354 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC005040.1-201ENST00000437783 482 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC019080.2-201ENST00000453859 394 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 TREML3P-201ENST00000457327 501 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 RN7SL456P-201ENST00000469290 295 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 MTCO1P55-201ENST00000489829 745 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 HNRNPA1P17-201ENST00000496620 924 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC233290.1-201ENST00000553021 1186 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC138749.2-201ENST00000566048 167 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 ADAM3B-201ENST00000569937 840 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AL513548.2-201ENST00000602994 1207 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AP001554.1-201ENST00000604533 376 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AL034374.2-201ENST00000605281 548 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC080112.3-201ENST00000612552 880 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 AC069222.1-201ENST00000608028 3360 ntBASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
NPIPA3F8WFD2 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 RNA5SP429-201ENST00000363688 109 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 PRELID1P2-201ENST00000407805 396 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AL139100.1-201ENST00000408001 498 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 SNORA11D-201ENST00000408548 128 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 SNORA11E-201ENST00000408778 128 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 GAPDHP51-201ENST00000426454 1000 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 RPL14P5-201ENST00000436474 730 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.68□□□□□ -1.34
NPIPA3F8WFD2 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms