Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC016251.2-201ENST00000623393 3089 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 KYNUP1-201ENST00000466683 1406 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 CUBNP3-201ENST00000457461 1784 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 OR4C1P-202ENST00000641065 1569 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 VEZF1P1-201ENST00000423931 1541 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC125603.4-201ENST00000621942 2699 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 U3.1-201ENST00000362500 215 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 SSX6-201ENST00000376932 562 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 GAPDHP46-201ENST00000424043 994 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 SNX18P14-201ENST00000429308 574 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC000362.1-201ENST00000433725 425 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 OR3B1P-201ENST00000437536 893 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 RNA5SP116-201ENST00000516132 98 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 IGKV2-29-201ENST00000521304 372 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC133569.1-201ENST00000564327 373 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 CR382285.1-202ENST00000604687 547 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 OR6L2P-201ENST00000608207 925 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC110769.3-201ENST00000624567 1173 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 TMC3-AS1-206ENST00000612811 2726 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 SAMMSON-222ENST00000641901 2727 ntBASIC5.53□□□□□ -1.52
HLA-DRB4X5D2U9 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 CYP2G2P-201ENST00000594920 1485 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC106872.6-201ENST00000514228 1346 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 AC069222.1-201ENST00000608028 3360 ntBASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DRB4X5D2U9 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms