Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC007923.2-201ENST00000584218 1591 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 RNU1-122P-201ENST00000365538 156 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 SSX6-201ENST00000376932 562 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 MIR575-201ENST00000385013 94 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 RN7SKP225-201ENST00000410405 352 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC020983.1-201ENST00000417063 543 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC015820.1-201ENST00000473882 321 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 RN7SL152P-201ENST00000484176 298 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 RN7SL776P-201ENST00000493390 268 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC061975.3-201ENST00000583209 244 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC024085.1-201ENST00000604299 432 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC005070.2-201ENST00000604391 260 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AL078624.2-201ENST00000605063 554 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC007347.2-201ENST00000623044 180 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AL137918.1-201ENST00000624542 1922 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 AC068860.1-201ENST00000623701 3736 ntBASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPIPA3F8WFD2 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AC125232.1-201ENST00000452554 1408 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 MAPK10-354ENST00000641823 2732 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AC023886.2-201ENST00000321285 411 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 RPL34P19-201ENST00000415903 342 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 OR52S1P-201ENST00000427016 937 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AF305872.1-201ENST00000485217 471 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AC108120.1-201ENST00000506543 991 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 OR10J9P-201ENST00000511932 987 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 RNA5SP96-201ENST00000516041 107 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AC068790.1-201ENST00000536166 355 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 FAM30C-201ENST00000561158 410 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AC012640.3-201ENST00000607847 430 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AL161931.1-201ENST00000612768 246 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AC099667.1-201ENST00000624222 469 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 AC093909.6-201ENST00000624757 775 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 SNORA43.5-201ENST00000631270 138 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 CASC19-208ENST00000641056 1292 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 CASC19-227ENST00000641411 1285 ntBASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPIPA3F8WFD2 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms