Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC9.57□□□□□ -0.88
LRCH3Q96II8 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC9.57□□□□□ -0.88
LRCH3Q96II8 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC9.57□□□□□ -0.88
LRCH3Q96II8 OR8G3P-202ENST00000641572 1255 ntBASIC9.57□□□□□ -0.88
LRCH3Q96II8 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LRCH3Q96II8 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
LRCH3Q96II8 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC9.57□□□□□ -0.88
LRCH3Q96II8 DGKG-201ENST00000265022 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LRCH3Q96II8 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC9.57□□□□□ -0.88
LRCH3Q96II8 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
LRCH3Q96II8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 CRX-201ENST00000221996 4470 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 GNL3LP1-201ENST00000399458 1643 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 ERMARD-203ENST00000366773 2141 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 LINC00933-201ENST00000557887 2606 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 LINC00265-201ENST00000340510 3049 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AL662907.2-201ENST00000624339 3448 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 LINC00870-202ENST00000473713 2693 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC036108.3-201ENST00000564527 2677 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 PDZK1-205ENST00000451928 1897 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 CYP2C18-202ENST00000339022 1471 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 Y_RNA.38-201ENST00000362617 102 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 RNA5-8SP2-201ENST00000363564 152 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 RNU6-259P-201ENST00000383999 107 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 NHP2P2-201ENST00000396362 460 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 RPL7P8-201ENST00000411964 730 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 MTND2P23-201ENST00000422990 651 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 BTF3P10-201ENST00000433415 495 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AL022721.1-201ENST00000436521 505 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AL359711.1-201ENST00000441999 123 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 GTF3AP5-201ENST00000442645 697 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 RPL7P1-201ENST00000468161 747 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 RPL7P9-201ENST00000468715 747 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 PTGES3P3-201ENST00000511479 482 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC104417.1-201ENST00000523974 751 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 DEFB108A-201ENST00000530110 222 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC063947.2-201ENST00000547000 1256 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 EIF4EBP1P1-201ENST00000557776 341 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 MIR5705-201ENST00000579870 89 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 LGALS9DP-201ENST00000580112 764 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 SYPL1P2-201ENST00000582878 727 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC243960.1-201ENST00000595649 661 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 PRR13P3-201ENST00000603578 376 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC104458.1-201ENST00000608243 463 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 Six3os1_2.1-201ENST00000616963 217 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 PFN1P2-202ENST00000621347 397 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 IGHV3-54-201ENST00000622166 353 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 AL118508.2-201ENST00000622708 673 ntTSL 3 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 ZNF221-201ENST00000251269 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC025031.5-201ENST00000623851 2523 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 ABCC11-202ENST00000356608 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LRCH3Q96II8 C8orf48-201ENST00000297324 1445 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 TRIM60P14-201ENST00000513444 1419 ntBASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC025580.2-204ENST00000560077 2399 ntTSL 5 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC9.56□□□□□ -0.88
LRCH3Q96II8 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms