Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 HSPD1P1-201ENST00000503199 1726 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 MIR551B-201ENST00000384984 96 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 PDCL3P5-201ENST00000398028 722 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AL590143.1-201ENST00000405071 138 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 FTH1P5-201ENST00000425761 545 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 CDK7P1-201ENST00000434574 693 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC064862.5-201ENST00000440618 334 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 RNA5SP518-201ENST00000515957 119 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 CARSP2-201ENST00000520688 277 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC007066.2-202ENST00000566531 914 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 WDR45BP1-201ENST00000583470 1029 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AC025287.2-201ENST00000621911 668 ntBASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM71Q2Q1W2 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AL355974.1-201ENST00000618896 1708 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 RN7SKP184-201ENST00000362348 333 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 MIR187-201ENST00000385062 109 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 EEF1GP7-201ENST00000422983 703 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 CHCHD4P5-201ENST00000436684 427 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AC009237.4-201ENST00000441078 238 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 PABPC1P10-201ENST00000464731 381 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 RN7SL849P-201ENST00000485236 295 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AC105275.2-201ENST00000567907 711 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AC016405.2-201ENST00000607393 312 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 SYT14P1-202ENST00000600441 1448 ntBASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM71Q2Q1W2 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms