Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 AC073488.2-201ENST00000631903 751 ntBASIC7.54□□□□□ -1.2
CCDC78A2IDD5 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 AL034408.1-201ENST00000637712 664 ntBASIC7.54□□□□□ -1.2
CCDC78A2IDD5 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.54□□□□□ -1.2
CCDC78A2IDD5 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CCDC78A2IDD5 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 HSPA8P11-201ENST00000508840 1898 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AL162171.3-201ENST00000617439 3178 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC089998.1-201ENST00000548575 3141 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 SNORA40.4-201ENST00000390971 128 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 USP9YP19-201ENST00000412165 485 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AL627308.2-201ENST00000420014 432 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 NPM1P30-201ENST00000425092 828 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 RPL5P6-201ENST00000425640 886 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 GAPDHP51-201ENST00000426454 1000 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 SNX18P14-201ENST00000429308 574 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 PRPS1P2-201ENST00000430496 937 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 FTH1P10-202ENST00000430907 550 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 UBE2V2P1-201ENST00000434717 398 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 FO393419.1-201ENST00000443746 355 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AL583856.1-201ENST00000454078 1101 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC096922.1-201ENST00000461635 651 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC021269.1-201ENST00000526860 705 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 GTF2IP6-201ENST00000583143 541 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC010327.2-201ENST00000587647 488 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AL133406.3-201ENST00000606817 541 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 MFSD8-217ENST00000641178 4374 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 AC011592.1-201ENST00000624647 3634 ntBASIC7.53□□□□□ -1.2
CCDC78A2IDD5 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC78A2IDD5 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CCDC78A2IDD5 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CCDC78A2IDD5 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.52□□□□□ -1.2
CCDC78A2IDD5 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CCDC78A2IDD5 GTF2IP1-202ENST00000614592 2047 ntBASIC7.52□□□□□ -1.2
CCDC78A2IDD5 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 AL078621.1-201ENST00000272567 768 ntBASIC7.52□□□□□ -1.21
CCDC78A2IDD5 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 RN7SKP174-201ENST00000363803 330 ntBASIC7.52□□□□□ -1.21
CCDC78A2IDD5 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC78A2IDD5 PTMAP8-201ENST00000397729 342 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms