Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC008592.5-201ENST00000607856 547 ntBASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 AC097381.3-201ENST00000608962 462 ntBASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 AL109653.2-201ENST00000625029 1065 ntBASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 SNORA43.5-201ENST00000631270 138 ntBASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 AL033543.1-201ENST00000623440 13454 ntBASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 AC062029.1-202ENST00000606164 3651 ntBASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 ZNF658B-201ENST00000602828 3408 ntBASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC5.91□□□□□ -1.46
RCL1Q9Y2P8 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 BEND6-201ENST00000370745 579 ntTSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 TRAV17-201ENST00000390445 484 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 PHBP1-201ENST00000392260 808 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 RNA5SP203-201ENST00000410451 136 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 MTND6P1-201ENST00000417434 424 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 TRGV5P-201ENST00000419915 354 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 OR3B1P-201ENST00000437536 893 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 RPL5P17-201ENST00000469685 877 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 PA2G4P4-201ENST00000473864 1182 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AC015820.1-201ENST00000473882 321 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 RPS14P8-201ENST00000478778 369 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 RN7SL88P-201ENST00000480166 299 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 RN7SL201P-201ENST00000482306 296 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 RN7SL65P-201ENST00000485221 315 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AC026826.1-201ENST00000493002 361 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AC006499.1-201ENST00000511870 850 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 NTAN1P2-201ENST00000515730 940 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AC091820.1-201ENST00000523497 648 ntTSL 4 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.9□□□□□ -1.46
RCL1Q9Y2P8 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.9□□□□□ -1.47
RCL1Q9Y2P8 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RCL1Q9Y2P8 IARS-205ENST00000443024 4341 ntTSL 5 BASIC5.9□□□□□ -1.47
RCL1Q9Y2P8 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RCL1Q9Y2P8 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC5.9□□□□□ -1.47
RCL1Q9Y2P8 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RCL1Q9Y2P8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RCL1Q9Y2P8 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
RCL1Q9Y2P8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RCL1Q9Y2P8 AC073342.2-201ENST00000595842 1800 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms