Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC113192.3-201ENST00000529152 742 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 PSMC1P8-201ENST00000536820 1296 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AP000619.1-201ENST00000540293 1000 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC010538.1-201ENST00000615131 663 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC073857.1-201ENST00000625082 1054 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC104083.1-201ENST00000569449 2615 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 OR7E11P-202ENST00000642027 1491 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC018880.1-201ENST00000418898 1319 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AL023806.3-201ENST00000638502 2704 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 RNA5SP389-201ENST00000362610 115 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 RNA5SP226-201ENST00000362653 115 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 CYP2C56P-201ENST00000440076 291 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC108039.2-201ENST00000440214 359 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 RPSAP49-201ENST00000445182 886 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AL356390.1-201ENST00000455684 397 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 RN7SL55P-201ENST00000464534 297 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 ATG10-AS1-201ENST00000504846 648 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 EIF3KP1-201ENST00000513279 656 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC073111.2-201ENST00000605657 1075 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC124319.3-201ENST00000616832 526 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AL353898.2-201ENST00000623000 255 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AL136146.1-201ENST00000529830 1667 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
TRIM48Q8IWZ4 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 UG0898H09-202ENST00000623646 7040 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms