Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 AC211429.1-201ENST00000415277 523 ntBASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 KRT16P5-201ENST00000455284 522 ntBASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 AL121906.2-201ENST00000621597 723 ntBASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 LINC01023-201ENST00000606054 436 ntBASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1G3Q9Y6M4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 HLA-G-202ENST00000376815 851 ntBASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 HLA-G-203ENST00000376818 1127 ntBASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 ECEL1P3-201ENST00000427961 737 ntBASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1G3Q9Y6M4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 AL353807.1-201ENST00000427475 662 ntBASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 NBPF21P-201ENST00000425093 1451 ntBASIC19.6■□□□□ 0.73
CSNK1G3Q9Y6M4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms