Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
DNMT3AQ9Y6K1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DNMT3AQ9Y6K1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DNMT3AQ9Y6K1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 AC073314.1-201ENST00000568729 2216 ntBASIC19.63■□□□□ 0.73
DNMT3AQ9Y6K1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 AC006058.3-201ENST00000606217 1069 ntBASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.62■□□□□ 0.73
DNMT3AQ9Y6K1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 KRT18P29-201ENST00000397031 1267 ntBASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 TMEM191A-211ENST00000637163 1067 ntBASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DNMT3AQ9Y6K1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 AC128676.1-201ENST00000454392 318 ntBASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3AQ9Y6K1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 RPS2P52-201ENST00000469610 820 ntBASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 AL121829.2-201ENST00000620908 328 ntBASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DNMT3AQ9Y6K1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms