Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 EP400NL-214ENST00000641289 2402 ntBASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 SLC25A3P1-201ENST00000443844 931 ntBASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.04■□□□□ 0.96
HCFC2Q9Y5Z7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HCFC2Q9Y5Z7 FBXW4P1-201ENST00000426721 2239 ntBASIC21.02■□□□□ 0.96
HCFC2Q9Y5Z7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HCFC2Q9Y5Z7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HCFC2Q9Y5Z7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.02■□□□□ 0.96
HCFC2Q9Y5Z7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HCFC2Q9Y5Z7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HCFC2Q9Y5Z7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HCFC2Q9Y5Z7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
HCFC2Q9Y5Z7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.02■□□□□ 0.95
HCFC2Q9Y5Z7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HCFC2Q9Y5Z7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 Z98882.1-201ENST00000622160 2253 ntBASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 KRT8P20-201ENST00000423953 1409 ntBASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.01■□□□□ 0.95
HCFC2Q9Y5Z7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 DUX4L26-201ENST00000489078 1255 ntBASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 AC133561.1-201ENST00000568600 2415 ntBASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21■□□□□ 0.95
HCFC2Q9Y5Z7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HCFC2Q9Y5Z7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms