Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 PPP1R14BP5-201ENST00000440334 435 ntBASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 B3GAT3P1-201ENST00000471720 806 ntBASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC30.5■■■□□ 2.47
CDC42BPBQ9Y5S2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CDC42BPBQ9Y5S2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 AL590326.2-201ENST00000625139 305 ntBASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDC42BPBQ9Y5S2 AC104076.2-201ENST00000448912 469 ntBASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 AL445675.2-201ENST00000620291 557 ntBASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPBQ9Y5S2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 AL049796.1-201ENST00000565336 1766 ntBASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 AL121603.2-201ENST00000557373 2117 ntBASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 AP005242.2-201ENST00000580065 1175 ntBASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDC42BPBQ9Y5S2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC30.45■■■□□ 2.47
CDC42BPBQ9Y5S2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
CDC42BPBQ9Y5S2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
CDC42BPBQ9Y5S2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.45■■■□□ 2.47
CDC42BPBQ9Y5S2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CDC42BPBQ9Y5S2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CDC42BPBQ9Y5S2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CDC42BPBQ9Y5S2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC30.45■■■□□ 2.46
CDC42BPBQ9Y5S2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 AC022616.7-201ENST00000525383 220 ntBASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 MYC-208ENST00000641036 567 ntBASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPBQ9Y5S2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
CDC42BPBQ9Y5S2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDC42BPBQ9Y5S2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC30.43■■■□□ 2.46
CDC42BPBQ9Y5S2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
CDC42BPBQ9Y5S2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC30.43■■■□□ 2.46
CDC42BPBQ9Y5S2 ECEL1P2-202ENST00000465689 757 ntBASIC30.43■■■□□ 2.46
CDC42BPBQ9Y5S2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDC42BPBQ9Y5S2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CDC42BPBQ9Y5S2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDC42BPBQ9Y5S2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms