Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 ITM2C-210ENST00000620962 501 ntBASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 AC006058.3-201ENST00000606217 1069 ntBASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 AC073648.6-201ENST00000641589 218 ntBASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLDN16Q9Y5I7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 PRORSD1P-201ENST00000295112 541 ntBASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 AC128676.1-201ENST00000454392 318 ntBASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 RPS2P52-201ENST00000469610 820 ntBASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 AC069544.1-201ENST00000609399 999 ntBASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN16Q9Y5I7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 FAM201B-201ENST00000458407 597 ntBASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN16Q9Y5I7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms