Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 AC010331.1-201ENST00000611423 582 ntBASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 AC113410.3-201ENST00000623366 203 ntBASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA9Q9Y5G4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 PRKY-204ENST00000533551 1019 ntBASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGA9Q9Y5G4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA9Q9Y5G4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PCDHGA9Q9Y5G4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA9Q9Y5G4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGA9Q9Y5G4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms