Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.21■□□□□ 0.35
MRPS28Q9Y2Q9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MRPS28Q9Y2Q9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.21■□□□□ 0.34
MRPS28Q9Y2Q9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
MRPS28Q9Y2Q9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 AC018445.3-201ENST00000624177 1945 ntBASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 AL356652.1-201ENST00000615962 565 ntBASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MRPS28Q9Y2Q9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 KRT19P1-201ENST00000405746 1186 ntBASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MRPS28Q9Y2Q9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 BX323043.1-201ENST00000641006 1765 ntBASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 AC087633.2-202ENST00000565166 1439 ntBASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MRPS28Q9Y2Q9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms