Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FNDC3AQ9Y2H6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FNDC3AQ9Y2H6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FNDC3AQ9Y2H6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
FNDC3AQ9Y2H6 AC138932.1-201ENST00000534164 6830 ntBASIC20.43■□□□□ 0.86
FNDC3AQ9Y2H6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
FNDC3AQ9Y2H6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
FNDC3AQ9Y2H6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FNDC3AQ9Y2H6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 AC092667.1-201ENST00000434301 2586 ntBASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 CYP21A1P-202ENST00000354927 1481 ntBASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FNDC3AQ9Y2H6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 RPPH1-201ENST00000516869 333 ntBASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 C1QBPP2-201ENST00000528754 825 ntBASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 PNMA6B-201ENST00000538162 1200 ntBASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 FAM197Y4-202ENST00000622692 608 ntBASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
FNDC3AQ9Y2H6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC3AQ9Y2H6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FNDC3AQ9Y2H6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FNDC3AQ9Y2H6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FNDC3AQ9Y2H6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FNDC3AQ9Y2H6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
FNDC3AQ9Y2H6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 MIR718-201ENST00000390190 70 ntBASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms