Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 NEFHP1-201ENST00000412845 2629 ntBASIC14.62□□□□□ -0.07
HHLA3Q9XRX5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 AC016769.1-201ENST00000409132 1010 ntBASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 KRT18P61-201ENST00000585825 1298 ntBASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 UBE2DNL-204ENST00000602536 740 ntBASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HHLA3Q9XRX5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 RARRES2P11-201ENST00000635158 484 ntBASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
HHLA3Q9XRX5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 AC005082.1-201ENST00000413042 2259 ntBASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 AL162430.1-201ENST00000480705 870 ntBASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 MYCNOS-205ENST00000641950 531 ntBASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 AC011484.1-201ENST00000377652 1995 ntBASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.59□□□□□ -0.07
HHLA3Q9XRX5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HHLA3Q9XRX5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HHLA3Q9XRX5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.58□□□□□ -0.07
HHLA3Q9XRX5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms