Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 TSPY20P-201ENST00000450910 630 ntBASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT6Q9ULM6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 UNC93B5-201ENST00000530315 699 ntBASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT6Q9ULM6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 ABHD17AP1-201ENST00000358206 933 ntBASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 PNMA6B-201ENST00000538162 1200 ntBASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT6Q9ULM6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT6Q9ULM6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT6Q9ULM6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.02■□□□□ 0.79
CNOT6Q9ULM6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CNOT6Q9ULM6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 AC092368.3-202ENST00000574180 1591 ntBASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT6Q9ULM6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNOT6Q9ULM6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT6Q9ULM6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT6Q9ULM6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT6Q9ULM6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20■□□□□ 0.79
CNOT6Q9ULM6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT6Q9ULM6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20■□□□□ 0.79
CNOT6Q9ULM6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT6Q9ULM6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT6Q9ULM6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT6Q9ULM6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20■□□□□ 0.79
CNOT6Q9ULM6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CNOT6Q9ULM6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT6Q9ULM6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms