Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.19■□□□□ 0.98
CDH9Q9ULB4 PRKY-204ENST00000533551 1019 ntBASIC21.19■□□□□ 0.98
CDH9Q9ULB4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH9Q9ULB4 AL121906.2-201ENST00000621597 723 ntBASIC21.19■□□□□ 0.98
CDH9Q9ULB4 FAM197Y4-202ENST00000622692 608 ntBASIC21.19■□□□□ 0.98
CDH9Q9ULB4 AL023875.1-201ENST00000640777 796 ntBASIC21.19■□□□□ 0.98
CDH9Q9ULB4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
CDH9Q9ULB4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH9Q9ULB4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CDH9Q9ULB4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH9Q9ULB4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH9Q9ULB4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH9Q9ULB4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 UBE2SP1-201ENST00000450587 669 ntBASIC21.18■□□□□ 0.98
CDH9Q9ULB4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 AC133681.1-201ENST00000465482 601 ntBASIC21.18■□□□□ 0.98
CDH9Q9ULB4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 AC073314.1-201ENST00000568729 2216 ntBASIC21.18■□□□□ 0.98
CDH9Q9ULB4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH9Q9ULB4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 AC239809.2-201ENST00000415381 517 ntBASIC21.17■□□□□ 0.98
CDH9Q9ULB4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 AC124016.1-201ENST00000609552 612 ntBASIC21.17■□□□□ 0.98
CDH9Q9ULB4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 AP005212.1-201ENST00000581547 1997 ntBASIC21.17■□□□□ 0.98
CDH9Q9ULB4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDH9Q9ULB4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 AP006294.2-201ENST00000641667 209 ntBASIC21.16■□□□□ 0.98
CDH9Q9ULB4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH9Q9ULB4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms