Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 AC105020.6-201ENST00000621523 1217 ntBASIC19.87■□□□□ 0.77
TSR3Q9UJK0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.87■□□□□ 0.77
TSR3Q9UJK0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSR3Q9UJK0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
TSR3Q9UJK0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.87■□□□□ 0.77
TSR3Q9UJK0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSR3Q9UJK0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TSR3Q9UJK0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.87■□□□□ 0.77
TSR3Q9UJK0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.87■□□□□ 0.77
TSR3Q9UJK0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 AC083906.2-201ENST00000511578 360 ntBASIC19.86■□□□□ 0.77
TSR3Q9UJK0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.86■□□□□ 0.77
TSR3Q9UJK0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 LSM12P1-201ENST00000411836 588 ntBASIC19.85■□□□□ 0.77
TSR3Q9UJK0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSR3Q9UJK0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 AC133552.2-202ENST00000575694 574 ntBASIC19.84■□□□□ 0.77
TSR3Q9UJK0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 AL121832.2-201ENST00000610979 668 ntBASIC19.84■□□□□ 0.77
TSR3Q9UJK0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.84■□□□□ 0.77
TSR3Q9UJK0 AL162377.1-201ENST00000618844 1793 ntBASIC19.83■□□□□ 0.77
TSR3Q9UJK0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TSR3Q9UJK0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.83■□□□□ 0.77
TSR3Q9UJK0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TSR3Q9UJK0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TSR3Q9UJK0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TSR3Q9UJK0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TSR3Q9UJK0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TSR3Q9UJK0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TSR3Q9UJK0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TSR3Q9UJK0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms