Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.91■□□□□ 0.78
SPASTQ9UBP0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPASTQ9UBP0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.89■□□□□ 0.77
SPASTQ9UBP0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SPASTQ9UBP0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 MTDHP1-201ENST00000605323 784 ntBASIC19.87■□□□□ 0.77
SPASTQ9UBP0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPASTQ9UBP0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms