Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 B3GAT3P1-201ENST00000471720 806 ntBASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 AC011506.1-201ENST00000474329 610 ntBASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CXXC1Q9P0U4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 AL031133.1-201ENST00000406807 723 ntBASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
CXXC1Q9P0U4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 PTBP1P-201ENST00000554374 1601 ntBASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 AC091390.4-202ENST00000476426 537 ntBASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.6■■□□□ 1.05
CXXC1Q9P0U4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 AC026271.3-201ENST00000571884 352 ntBASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 AL445675.2-201ENST00000620291 557 ntBASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.59■■□□□ 1.05
CXXC1Q9P0U4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.58■■□□□ 1.05
CXXC1Q9P0U4 FAM8A6P-201ENST00000407496 1135 ntBASIC21.58■■□□□ 1.05
CXXC1Q9P0U4 AC097488.1-201ENST00000507834 756 ntBASIC21.58■■□□□ 1.05
CXXC1Q9P0U4 LINC01238-205ENST00000567549 1107 ntBASIC21.58■■□□□ 1.05
CXXC1Q9P0U4 C1QL1P1-201ENST00000568105 661 ntBASIC21.58■■□□□ 1.05
CXXC1Q9P0U4 AC139887.4-201ENST00000607877 719 ntBASIC21.58■■□□□ 1.05
CXXC1Q9P0U4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CXXC1Q9P0U4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CXXC1Q9P0U4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.58■■□□□ 1.04
CXXC1Q9P0U4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CXXC1Q9P0U4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CXXC1Q9P0U4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CXXC1Q9P0U4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CXXC1Q9P0U4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CXXC1Q9P0U4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CXXC1Q9P0U4 HLA-G-202ENST00000376815 851 ntBASIC21.57■■□□□ 1.04
CXXC1Q9P0U4 HLA-G-203ENST00000376818 1127 ntBASIC21.57■■□□□ 1.04
CXXC1Q9P0U4 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.57■■□□□ 1.04
CXXC1Q9P0U4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.57■■□□□ 1.04
CXXC1Q9P0U4 AC128688.1-201ENST00000487626 519 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms