Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 AC087633.2-202ENST00000565166 1439 ntBASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 TCF3P1-201ENST00000423021 1937 ntBASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 AC016769.1-201ENST00000409132 1010 ntBASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 AL162412.1-201ENST00000567129 965 ntBASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 KRT18P61-201ENST00000585825 1298 ntBASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 MIR6821-201ENST00000617625 74 ntBASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.79■□□□□ 0.28
KCNIP1Q9NZI2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP1Q9NZI2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 AFG3L1P-217ENST00000557444 2447 ntBASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNIP1Q9NZI2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.77■□□□□ 0.27
KCNIP1Q9NZI2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.77■□□□□ 0.27
KCNIP1Q9NZI2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.77■□□□□ 0.27
KCNIP1Q9NZI2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
KCNIP1Q9NZI2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.77■□□□□ 0.27
KCNIP1Q9NZI2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.77■□□□□ 0.27
KCNIP1Q9NZI2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms