Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 FP700111.2-201ENST00000619190 1892 ntBASIC17.25■□□□□ 0.35
TREM2Q9NZC2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 MYC-209ENST00000641252 345 ntBASIC17.25■□□□□ 0.35
TREM2Q9NZC2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREM2Q9NZC2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.24■□□□□ 0.35
TREM2Q9NZC2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 AC027702.1-201ENST00000563810 1770 ntBASIC17.23■□□□□ 0.35
TREM2Q9NZC2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 KRT18P29-201ENST00000397031 1267 ntBASIC17.23■□□□□ 0.35
TREM2Q9NZC2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 AL356652.1-201ENST00000615962 565 ntBASIC17.23■□□□□ 0.35
TREM2Q9NZC2 AC105020.6-201ENST00000621523 1217 ntBASIC17.23■□□□□ 0.35
TREM2Q9NZC2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREM2Q9NZC2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 AC087633.2-202ENST00000565166 1439 ntBASIC17.22■□□□□ 0.35
TREM2Q9NZC2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms