Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.65■□□□□ 0.58
RLIMQ9NVW2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.64■□□□□ 0.58
RLIMQ9NVW2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RLIMQ9NVW2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RLIMQ9NVW2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RLIMQ9NVW2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.64■□□□□ 0.58
RLIMQ9NVW2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.64■□□□□ 0.58
RLIMQ9NVW2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RLIMQ9NVW2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
RLIMQ9NVW2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 CNN2P6-201ENST00000439038 900 ntBASIC18.64■□□□□ 0.57
RLIMQ9NVW2 AC007322.4-201ENST00000509611 723 ntBASIC18.64■□□□□ 0.57
RLIMQ9NVW2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 MIR5787-201ENST00000611784 55 ntBASIC18.64■□□□□ 0.57
RLIMQ9NVW2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 AC098818.2-201ENST00000564925 2320 ntBASIC18.64■□□□□ 0.57
RLIMQ9NVW2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 CYP21A1P-202ENST00000354927 1481 ntBASIC18.64■□□□□ 0.57
RLIMQ9NVW2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RLIMQ9NVW2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.63■□□□□ 0.57
RLIMQ9NVW2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 AL162412.1-201ENST00000567129 965 ntBASIC18.62■□□□□ 0.57
RLIMQ9NVW2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 AL356652.1-201ENST00000615962 565 ntBASIC18.62■□□□□ 0.57
RLIMQ9NVW2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 AC068338.2-201ENST00000563278 1430 ntBASIC18.62■□□□□ 0.57
RLIMQ9NVW2 AC087633.2-202ENST00000565166 1439 ntBASIC18.62■□□□□ 0.57
RLIMQ9NVW2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RLIMQ9NVW2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 AC018445.3-201ENST00000624177 1945 ntBASIC18.61■□□□□ 0.57
RLIMQ9NVW2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RLIMQ9NVW2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms