Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 AL138781.1-201ENST00000566567 1274 ntBASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 AC142086.2-201ENST00000569753 217 ntBASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 AC133041.1-202ENST00000642053 222 ntBASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.42■□□□□ 0.54
UBQLN4Q9NRR5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.41■□□□□ 0.54
UBQLN4Q9NRR5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 KRT16P6-202ENST00000425692 1426 ntBASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 ID1-201ENST00000376105 1233 ntBASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 HLA-L-209ENST00000420110 1011 ntBASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 AC069152.1-201ENST00000438030 544 ntBASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBQLN4Q9NRR5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.39■□□□□ 0.54
UBQLN4Q9NRR5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
UBQLN4Q9NRR5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
UBQLN4Q9NRR5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBQLN4Q9NRR5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBQLN4Q9NRR5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.39■□□□□ 0.54
UBQLN4Q9NRR5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 MYC-209ENST00000641252 345 ntBASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBQLN4Q9NRR5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms