Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLE3Q9NRF9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLE3Q9NRF9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.58■□□□□ 0.57
POLE3Q9NRF9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.58■□□□□ 0.57
POLE3Q9NRF9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLE3Q9NRF9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLE3Q9NRF9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 AC004911.1-201ENST00000416316 871 ntBASIC18.58■□□□□ 0.56
POLE3Q9NRF9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.58■□□□□ 0.56
POLE3Q9NRF9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 AC073111.5-205ENST00000641717 521 ntBASIC18.58■□□□□ 0.56
POLE3Q9NRF9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLE3Q9NRF9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
POLE3Q9NRF9 PTBP1P-201ENST00000554374 1601 ntBASIC18.56■□□□□ 0.56
POLE3Q9NRF9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
POLE3Q9NRF9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 AL031963.3-201ENST00000606441 850 ntBASIC18.55■□□□□ 0.56
POLE3Q9NRF9 IKBKGP1-201ENST00000612193 1073 ntBASIC18.55■□□□□ 0.56
POLE3Q9NRF9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.55■□□□□ 0.56
POLE3Q9NRF9 KRT8P17-201ENST00000453110 1448 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms