Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 AC133041.1-202ENST00000642053 222 ntBASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 AC073210.2-201ENST00000430369 194 ntBASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 AL589743.5-201ENST00000616611 1050 ntBASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 MIR2861-201ENST00000636310 90 ntBASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECTIN3Q9NQS3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NECTIN3Q9NQS3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NECTIN3Q9NQS3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 DUSP5P2-201ENST00000426873 1033 ntBASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 AL356652.1-201ENST00000615962 565 ntBASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 AC105020.6-201ENST00000621523 1217 ntBASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECTIN3Q9NQS3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 AC091874.3-201ENST00000512672 1195 ntBASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NECTIN3Q9NQS3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 PGM5P4-201ENST00000421970 445 ntBASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECTIN3Q9NQS3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms