Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SLC25A24-204ENST00000569674 2357 ntBASIC20.75■□□□□ 0.91
HPS4Q9NQG7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPS4Q9NQG7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 MIR4785-201ENST00000585005 73 ntBASIC20.73■□□□□ 0.91
HPS4Q9NQG7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 AL121829.2-201ENST00000620908 328 ntBASIC20.73■□□□□ 0.91
HPS4Q9NQG7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS4Q9NQG7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 LINC01023-201ENST00000606054 436 ntBASIC20.72■□□□□ 0.91
HPS4Q9NQG7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS4Q9NQG7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 FAM210CP-201ENST00000445714 574 ntBASIC20.71■□□□□ 0.91
HPS4Q9NQG7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS4Q9NQG7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.7■□□□□ 0.9
HPS4Q9NQG7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS4Q9NQG7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS4Q9NQG7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS4Q9NQG7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS4Q9NQG7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HPS4Q9NQG7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HPS4Q9NQG7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS4Q9NQG7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.7■□□□□ 0.9
HPS4Q9NQG7 AL355075.4-201ENST00000554988 638 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms