Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.98■■□□□ 1.11
VPS16Q9H269 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS16Q9H269 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 RNF165-205ENST00000588679 2904 ntBASIC21.97■■□□□ 1.11
VPS16Q9H269 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
VPS16Q9H269 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS16Q9H269 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 AC034268.1-201ENST00000441047 882 ntBASIC21.97■■□□□ 1.11
VPS16Q9H269 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS16Q9H269 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS16Q9H269 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS16Q9H269 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
VPS16Q9H269 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS16Q9H269 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS16Q9H269 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS16Q9H269 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS16Q9H269 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
VPS16Q9H269 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS16Q9H269 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS16Q9H269 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
VPS16Q9H269 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.96■■□□□ 1.11
VPS16Q9H269 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.96■■□□□ 1.11
VPS16Q9H269 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.96■■□□□ 1.11
VPS16Q9H269 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS16Q9H269 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.96■■□□□ 1.11
VPS16Q9H269 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
VPS16Q9H269 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS16Q9H269 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
VPS16Q9H269 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.95■■□□□ 1.11
VPS16Q9H269 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS16Q9H269 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS16Q9H269 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VPS16Q9H269 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
VPS16Q9H269 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS16Q9H269 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS16Q9H269 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.95■■□□□ 1.1
VPS16Q9H269 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.95■■□□□ 1.1
VPS16Q9H269 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
VPS16Q9H269 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS16Q9H269 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS16Q9H269 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
VPS16Q9H269 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS16Q9H269 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
VPS16Q9H269 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.94■■□□□ 1.1
VPS16Q9H269 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS16Q9H269 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
VPS16Q9H269 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS16Q9H269 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
VPS16Q9H269 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS16Q9H269 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS16Q9H269 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.94■■□□□ 1.1
VPS16Q9H269 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS16Q9H269 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS16Q9H269 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS16Q9H269 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
VPS16Q9H269 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS16Q9H269 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS16Q9H269 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
VPS16Q9H269 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS16Q9H269 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS16Q9H269 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS16Q9H269 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
VPS16Q9H269 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS16Q9H269 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS16Q9H269 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS16Q9H269 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS16Q9H269 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS16Q9H269 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS16Q9H269 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS16Q9H269 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
VPS16Q9H269 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS16Q9H269 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS16Q9H269 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS16Q9H269 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.93■■□□□ 1.1
VPS16Q9H269 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
VPS16Q9H269 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms