Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.11■□□□□ 0.81
CLPBQ9H078 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPBQ9H078 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.11■□□□□ 0.81
CLPBQ9H078 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPBQ9H078 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPBQ9H078 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLPBQ9H078 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.11■□□□□ 0.81
CLPBQ9H078 PNMA6B-201ENST00000538162 1200 ntBASIC20.11■□□□□ 0.81
CLPBQ9H078 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.11■□□□□ 0.81
CLPBQ9H078 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.11■□□□□ 0.81
CLPBQ9H078 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.11■□□□□ 0.81
CLPBQ9H078 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.11■□□□□ 0.81
CLPBQ9H078 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.11■□□□□ 0.81
CLPBQ9H078 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLPBQ9H078 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CLPBQ9H078 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.11■□□□□ 0.81
CLPBQ9H078 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPBQ9H078 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPBQ9H078 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLPBQ9H078 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPBQ9H078 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CLPBQ9H078 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLPBQ9H078 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CLPBQ9H078 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.1■□□□□ 0.81
CLPBQ9H078 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
CLPBQ9H078 AC092368.3-202ENST00000574180 1591 ntBASIC20.1■□□□□ 0.81
CLPBQ9H078 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.1■□□□□ 0.81
CLPBQ9H078 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.1■□□□□ 0.81
CLPBQ9H078 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 AC142381.4-202ENST00000563973 229 ntBASIC20.1■□□□□ 0.81
CLPBQ9H078 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.1■□□□□ 0.81
CLPBQ9H078 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLPBQ9H078 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLPBQ9H078 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.1■□□□□ 0.81
CLPBQ9H078 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPBQ9H078 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CLPBQ9H078 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLPBQ9H078 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 AL158047.1-201ENST00000445918 881 ntBASIC20.09■□□□□ 0.81
CLPBQ9H078 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CLPBQ9H078 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLPBQ9H078 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.09■□□□□ 0.81
CLPBQ9H078 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.09■□□□□ 0.81
CLPBQ9H078 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPBQ9H078 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLPBQ9H078 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLPBQ9H078 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
CLPBQ9H078 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLPBQ9H078 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.08■□□□□ 0.81
CLPBQ9H078 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.08■□□□□ 0.81
CLPBQ9H078 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLPBQ9H078 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLPBQ9H078 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLPBQ9H078 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLPBQ9H078 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLPBQ9H078 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.08■□□□□ 0.81
CLPBQ9H078 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CLPBQ9H078 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.08■□□□□ 0.81
CLPBQ9H078 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLPBQ9H078 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.08■□□□□ 0.81
CLPBQ9H078 UNC93B4-201ENST00000505679 747 ntBASIC20.08■□□□□ 0.81
CLPBQ9H078 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.08■□□□□ 0.81
CLPBQ9H078 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.08■□□□□ 0.81
CLPBQ9H078 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLPBQ9H078 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.08■□□□□ 0.8
CLPBQ9H078 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.8
CLPBQ9H078 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CLPBQ9H078 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLPBQ9H078 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.08■□□□□ 0.8
CLPBQ9H078 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLPBQ9H078 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CLPBQ9H078 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.07■□□□□ 0.8
CLPBQ9H078 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.07■□□□□ 0.8
CLPBQ9H078 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPBQ9H078 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms