Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 KRT18P20-201ENST00000548986 1279 ntBASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 AC022517.1-201ENST00000592429 346 ntBASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.7■□□□□ 0.58
AMBRA1Q9C0C7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 RBM17P2-201ENST00000616397 1405 ntBASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 AC243732.1-201ENST00000612648 864 ntBASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 AC093484.2-201ENST00000580996 2166 ntBASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 AL691432.2-201ENST00000607222 2038 ntBASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.69■□□□□ 0.58
AMBRA1Q9C0C7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 KRT19P1-201ENST00000405746 1186 ntBASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 AC007322.3-201ENST00000426526 701 ntBASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AMBRA1Q9C0C7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
AMBRA1Q9C0C7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms