Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 NBPF21P-201ENST00000425093 1451 ntBASIC20.96■□□□□ 0.95
LRRC3Q9BY71 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 KRT16P5-201ENST00000455284 522 ntBASIC20.96■□□□□ 0.95
LRRC3Q9BY71 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.96■□□□□ 0.95
LRRC3Q9BY71 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRRC3Q9BY71 AF106564.1-201ENST00000607058 2553 ntBASIC20.95■□□□□ 0.95
LRRC3Q9BY71 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.95■□□□□ 0.94
LRRC3Q9BY71 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 MIR4785-201ENST00000585005 73 ntBASIC20.95■□□□□ 0.94
LRRC3Q9BY71 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC3Q9BY71 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 AL355075.4-201ENST00000554988 638 ntBASIC20.94■□□□□ 0.94
LRRC3Q9BY71 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 AL121906.2-201ENST00000621597 723 ntBASIC20.94■□□□□ 0.94
LRRC3Q9BY71 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC3Q9BY71 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 AF186192.3-201ENST00000583427 947 ntBASIC20.93■□□□□ 0.94
LRRC3Q9BY71 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 HTR7P1-201ENST00000538670 1336 ntBASIC20.93■□□□□ 0.94
LRRC3Q9BY71 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LRRC3Q9BY71 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.92■□□□□ 0.94
LRRC3Q9BY71 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms