Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 HLA-G-202ENST00000376815 851 ntBASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 HLA-G-203ENST00000376818 1127 ntBASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 AL024507.2-201ENST00000606070 2574 ntBASIC24.48■■□□□ 1.51
RTFDC1Q9BY42 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 SLC25A3P1-201ENST00000443844 931 ntBASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTFDC1Q9BY42 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 AL137013.1-201ENST00000432946 1228 ntBASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.46■■□□□ 1.51
RTFDC1Q9BY42 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RTFDC1Q9BY42 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTFDC1Q9BY42 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 MESTP1-201ENST00000404287 994 ntBASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTFDC1Q9BY42 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 AC104076.2-201ENST00000448912 469 ntBASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.43■■□□□ 1.5
RTFDC1Q9BY42 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms