Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.82■□□□□ 0.6
PKP2Q99959 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP2Q99959 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.82■□□□□ 0.6
PKP2Q99959 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP2Q99959 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP2Q99959 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP2Q99959 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
PKP2Q99959 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PKP2Q99959 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PKP2Q99959 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP2Q99959 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP2Q99959 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP2Q99959 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP2Q99959 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP2Q99959 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PKP2Q99959 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
PKP2Q99959 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PKP2Q99959 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP2Q99959 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PKP2Q99959 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
PKP2Q99959 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.81■□□□□ 0.6
PKP2Q99959 AC011298.3-201ENST00000615796 283 ntBASIC18.81■□□□□ 0.6
PKP2Q99959 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PKP2Q99959 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.81■□□□□ 0.6
PKP2Q99959 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.81■□□□□ 0.6
PKP2Q99959 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PKP2Q99959 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.8■□□□□ 0.6
PKP2Q99959 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.8■□□□□ 0.6
PKP2Q99959 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PKP2Q99959 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PKP2Q99959 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PKP2Q99959 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.79■□□□□ 0.6
PKP2Q99959 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.79■□□□□ 0.6
PKP2Q99959 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.79■□□□□ 0.6
PKP2Q99959 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PKP2Q99959 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.79■□□□□ 0.6
PKP2Q99959 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PKP2Q99959 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PKP2Q99959 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PKP2Q99959 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PKP2Q99959 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.78■□□□□ 0.6
PKP2Q99959 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.78■□□□□ 0.6
PKP2Q99959 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.78■□□□□ 0.6
PKP2Q99959 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PKP2Q99959 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms