Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 AC105036.2-201ENST00000569468 176 ntBASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB18PQ96TA0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 AL031963.3-201ENST00000606441 850 ntBASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB18PQ96TA0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 AF201337.1-201ENST00000520239 748 ntBASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHB18PQ96TA0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 MKRN4P-201ENST00000444706 1521 ntBASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHB18PQ96TA0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB18PQ96TA0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 KRT8P20-201ENST00000423953 1409 ntBASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 LSM12P1-201ENST00000411836 588 ntBASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms