Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 AC008894.3-201ENST00000624324 3103 ntBASIC17.08■□□□□ 0.32
CITED4Q96RK1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CITED4Q96RK1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CITED4Q96RK1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CITED4Q96RK1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CITED4Q96RK1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 AC004448.1-201ENST00000458332 883 ntBASIC17.07■□□□□ 0.32
CITED4Q96RK1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 MIR4466-201ENST00000606121 54 ntBASIC17.07■□□□□ 0.32
CITED4Q96RK1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 TNRC18P3-201ENST00000441896 2691 ntBASIC17.07■□□□□ 0.32
CITED4Q96RK1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.07■□□□□ 0.32
CITED4Q96RK1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CITED4Q96RK1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CITED4Q96RK1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.06■□□□□ 0.32
CITED4Q96RK1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CITED4Q96RK1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms