Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.72■■□□□ 1.39
NEK1Q96PY6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.72■■□□□ 1.39
NEK1Q96PY6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.72■■□□□ 1.39
NEK1Q96PY6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NEK1Q96PY6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NEK1Q96PY6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NEK1Q96PY6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 AC023632.3-201ENST00000521633 145 ntBASIC23.71■■□□□ 1.39
NEK1Q96PY6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NEK1Q96PY6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NEK1Q96PY6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 AC092118.2-201ENST00000613495 667 ntBASIC23.71■■□□□ 1.39
NEK1Q96PY6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.71■■□□□ 1.39
NEK1Q96PY6 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.71■■□□□ 1.39
NEK1Q96PY6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.7■■□□□ 1.38
NEK1Q96PY6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NEK1Q96PY6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.7■■□□□ 1.38
NEK1Q96PY6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NEK1Q96PY6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NEK1Q96PY6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
NEK1Q96PY6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NEK1Q96PY6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NEK1Q96PY6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
NEK1Q96PY6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NEK1Q96PY6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
NEK1Q96PY6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.7■■□□□ 1.38
NEK1Q96PY6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NEK1Q96PY6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NEK1Q96PY6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NEK1Q96PY6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NEK1Q96PY6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NEK1Q96PY6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.69■■□□□ 1.38
NEK1Q96PY6 DUSP5P2-201ENST00000426873 1033 ntBASIC23.69■■□□□ 1.38
NEK1Q96PY6 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.69■■□□□ 1.38
NEK1Q96PY6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.69■■□□□ 1.38
NEK1Q96PY6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.69■■□□□ 1.38
NEK1Q96PY6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NEK1Q96PY6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
NEK1Q96PY6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.69■■□□□ 1.38
NEK1Q96PY6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NEK1Q96PY6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NEK1Q96PY6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 HLA-G-202ENST00000376815 851 ntBASIC23.68■■□□□ 1.38
NEK1Q96PY6 HLA-G-203ENST00000376818 1127 ntBASIC23.68■■□□□ 1.38
NEK1Q96PY6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.68■■□□□ 1.38
NEK1Q96PY6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NEK1Q96PY6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NEK1Q96PY6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
NEK1Q96PY6 HLA-L-209ENST00000420110 1011 ntBASIC23.67■■□□□ 1.38
NEK1Q96PY6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms