Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 AP006294.2-201ENST00000641667 209 ntBASIC15.56■□□□□ 0.08
DUX3Q96PT4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 SLC25A24-204ENST00000569674 2357 ntBASIC15.55■□□□□ 0.08
DUX3Q96PT4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 KRT8P36-201ENST00000489121 1440 ntBASIC15.55■□□□□ 0.08
DUX3Q96PT4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 AL390719.1-204ENST00000412397 1219 ntBASIC15.55■□□□□ 0.08
DUX3Q96PT4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 AC005829.2-201ENST00000571422 1056 ntBASIC15.55■□□□□ 0.08
DUX3Q96PT4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.55■□□□□ 0.08
DUX3Q96PT4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUX3Q96PT4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUX3Q96PT4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUX3Q96PT4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DUX3Q96PT4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUX3Q96PT4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUX3Q96PT4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUX3Q96PT4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DUX3Q96PT4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DUX3Q96PT4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
DUX3Q96PT4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUX3Q96PT4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 HCG11-201ENST00000411553 5696 ntBASIC15.53■□□□□ 0.08
DUX3Q96PT4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms