Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 KRT18P6-201ENST00000555540 1265 ntBASIC16.67■□□□□ 0.26
GAFA1Q96PS6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GAFA1Q96PS6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 KRT16P6-202ENST00000425692 1426 ntBASIC16.66■□□□□ 0.26
GAFA1Q96PS6 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.66■□□□□ 0.26
GAFA1Q96PS6 RNA5SP413-201ENST00000516373 109 ntBASIC16.66■□□□□ 0.26
GAFA1Q96PS6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 AC006557.6-201ENST00000623071 864 ntBASIC16.66■□□□□ 0.26
GAFA1Q96PS6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GAFA1Q96PS6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.65■□□□□ 0.26
GAFA1Q96PS6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAFA1Q96PS6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAFA1Q96PS6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms