Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC138Q96M89 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CCDC138Q96M89 MIR663A-201ENST00000385250 93 ntBASIC19.74■□□□□ 0.75
CCDC138Q96M89 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC138Q96M89 CROCCP5-201ENST00000436658 830 ntBASIC19.74■□□□□ 0.75
CCDC138Q96M89 AC093787.1-201ENST00000450396 207 ntBASIC19.74■□□□□ 0.75
CCDC138Q96M89 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC138Q96M89 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 AF201337.1-201ENST00000520239 748 ntBASIC19.74■□□□□ 0.75
CCDC138Q96M89 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC138Q96M89 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC138Q96M89 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC138Q96M89 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC138Q96M89 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC138Q96M89 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCDC138Q96M89 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC138Q96M89 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC138Q96M89 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC138Q96M89 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC138Q96M89 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC138Q96M89 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 AL050303.2-201ENST00000619798 666 ntBASIC19.73■□□□□ 0.75
CCDC138Q96M89 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC138Q96M89 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC138Q96M89 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC138Q96M89 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC138Q96M89 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC138Q96M89 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC138Q96M89 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC138Q96M89 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC138Q96M89 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 AC105036.2-201ENST00000569468 176 ntBASIC19.72■□□□□ 0.75
CCDC138Q96M89 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC138Q96M89 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 AC105020.6-201ENST00000621523 1217 ntBASIC19.72■□□□□ 0.75
CCDC138Q96M89 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC138Q96M89 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC138Q96M89 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC138Q96M89 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC138Q96M89 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC138Q96M89 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 AL355472.2-201ENST00000422958 438 ntBASIC19.71■□□□□ 0.75
CCDC138Q96M89 AC006970.2-201ENST00000450065 779 ntBASIC19.71■□□□□ 0.75
CCDC138Q96M89 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC138Q96M89 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC138Q96M89 AL589743.5-201ENST00000616611 1050 ntBASIC19.71■□□□□ 0.75
CCDC138Q96M89 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC138Q96M89 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC138Q96M89 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC138Q96M89 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC138Q96M89 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC138Q96M89 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
CCDC138Q96M89 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC138Q96M89 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms