Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 AC124283.5-201ENST00000624661 1809 ntBASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 GCSHP5-201ENST00000443090 522 ntBASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 MTDHP1-201ENST00000605323 784 ntBASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 KRT16P6-202ENST00000425692 1426 ntBASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMARCD1Q96GM5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 AC142381.4-202ENST00000563973 229 ntBASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCD1Q96GM5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMARCD1Q96GM5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.08■□□□□ 0.96
SMARCD1Q96GM5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMARCD1Q96GM5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMARCD1Q96GM5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SMARCD1Q96GM5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 GABARAPL3-202ENST00000624044 1851 ntBASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 C1QBPP2-201ENST00000528754 825 ntBASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 AL121906.2-201ENST00000621597 723 ntBASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SMARCD1Q96GM5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 AL121829.2-201ENST00000620908 328 ntBASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCD1Q96GM5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 AL158047.1-201ENST00000445918 881 ntBASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 AL359736.2-201ENST00000621992 437 ntBASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCD1Q96GM5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms