Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.61■□□□□ 0.57
CTHRC1Q96CG8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 AC092368.3-202ENST00000574180 1591 ntBASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 PNMA6B-201ENST00000538162 1200 ntBASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTHRC1Q96CG8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 AL390719.1-204ENST00000412397 1219 ntBASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTHRC1Q96CG8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CTHRC1Q96CG8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTHRC1Q96CG8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.58■□□□□ 0.57
CTHRC1Q96CG8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTHRC1Q96CG8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTHRC1Q96CG8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTHRC1Q96CG8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.58■□□□□ 0.57
CTHRC1Q96CG8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTHRC1Q96CG8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.58■□□□□ 0.56
CTHRC1Q96CG8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms