Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.52■■□□□ 1.04
TIFAQ96CG3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TIFAQ96CG3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIFAQ96CG3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIFAQ96CG3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TIFAQ96CG3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TIFAQ96CG3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.52■■□□□ 1.03
TIFAQ96CG3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TIFAQ96CG3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.51■■□□□ 1.03
TIFAQ96CG3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TIFAQ96CG3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIFAQ96CG3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TIFAQ96CG3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.51■■□□□ 1.03
TIFAQ96CG3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.51■■□□□ 1.03
TIFAQ96CG3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.51■■□□□ 1.03
TIFAQ96CG3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.51■■□□□ 1.03
TIFAQ96CG3 AC139887.4-201ENST00000607877 719 ntBASIC21.51■■□□□ 1.03
TIFAQ96CG3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIFAQ96CG3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIFAQ96CG3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIFAQ96CG3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIFAQ96CG3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIFAQ96CG3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TIFAQ96CG3 FAM99A-202ENST00000538190 1989 ntBASIC21.5■■□□□ 1.03
TIFAQ96CG3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
TIFAQ96CG3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TIFAQ96CG3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 INGX-201ENST00000359239 846 ntBASIC21.5■■□□□ 1.03
TIFAQ96CG3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.5■■□□□ 1.03
TIFAQ96CG3 AC092647.4-201ENST00000457211 535 ntBASIC21.5■■□□□ 1.03
TIFAQ96CG3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 DGCR10-201ENST00000609839 495 ntBASIC21.5■■□□□ 1.03
TIFAQ96CG3 AC093458.2-201ENST00000623150 629 ntBASIC21.5■■□□□ 1.03
TIFAQ96CG3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TIFAQ96CG3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIFAQ96CG3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIFAQ96CG3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIFAQ96CG3 PCED1CP-201ENST00000419887 785 ntBASIC21.49■■□□□ 1.03
TIFAQ96CG3 FAM207BP-201ENST00000447172 505 ntBASIC21.49■■□□□ 1.03
TIFAQ96CG3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.49■■□□□ 1.03
TIFAQ96CG3 AC026271.3-201ENST00000571884 352 ntBASIC21.49■■□□□ 1.03
TIFAQ96CG3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.49■■□□□ 1.03
TIFAQ96CG3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.49■■□□□ 1.03
TIFAQ96CG3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.49■■□□□ 1.03
TIFAQ96CG3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIFAQ96CG3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.49■■□□□ 1.03
TIFAQ96CG3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TIFAQ96CG3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIFAQ96CG3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TIFAQ96CG3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TIFAQ96CG3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TIFAQ96CG3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TIFAQ96CG3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIFAQ96CG3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.48■■□□□ 1.03
TIFAQ96CG3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.48■■□□□ 1.03
TIFAQ96CG3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TIFAQ96CG3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TIFAQ96CG3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIFAQ96CG3 HMGA1P5-201ENST00000412453 271 ntBASIC21.48■■□□□ 1.03
TIFAQ96CG3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.48■■□□□ 1.03
TIFAQ96CG3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.48■■□□□ 1.03
TIFAQ96CG3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.48■■□□□ 1.03
TIFAQ96CG3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIFAQ96CG3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TIFAQ96CG3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TIFAQ96CG3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIFAQ96CG3 AC233723.2-201ENST00000623798 2106 ntBASIC21.47■■□□□ 1.03
TIFAQ96CG3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.47■■□□□ 1.03
TIFAQ96CG3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIFAQ96CG3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIFAQ96CG3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TIFAQ96CG3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.47■■□□□ 1.03
TIFAQ96CG3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIFAQ96CG3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIFAQ96CG3 TSPY5P-201ENST00000426936 936 ntBASIC21.47■■□□□ 1.03
TIFAQ96CG3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.47■■□□□ 1.03
TIFAQ96CG3 AC097488.1-201ENST00000507834 756 ntBASIC21.47■■□□□ 1.03
TIFAQ96CG3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TIFAQ96CG3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.47■■□□□ 1.03
TIFAQ96CG3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.47■■□□□ 1.03
TIFAQ96CG3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.47■■□□□ 1.03
TIFAQ96CG3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.47■■□□□ 1.03
TIFAQ96CG3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIFAQ96CG3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIFAQ96CG3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TIFAQ96CG3 IER3-202ENST00000376377 1350 ntBASIC21.47■■□□□ 1.03
TIFAQ96CG3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIFAQ96CG3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIFAQ96CG3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
TIFAQ96CG3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
TIFAQ96CG3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TIFAQ96CG3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIFAQ96CG3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms