Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB1Q8WWH5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB1Q8WWH5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 AL032819.2-201ENST00000624543 2162 ntBASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 AC024257.2-201ENST00000549699 147 ntBASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB1Q8WWH5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 AC079598.2-202ENST00000546624 1451 ntBASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 AL691432.2-201ENST00000607222 2038 ntBASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 AC008764.7-201ENST00000593779 1081 ntBASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 AC120498.10-201ENST00000621827 505 ntBASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB1Q8WWH5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms