Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 SOX15-203ENST00000570788 1093 ntBASIC21.03■□□□□ 0.96
RNF139Q8WU17 AC005829.2-201ENST00000571422 1056 ntBASIC21.03■□□□□ 0.96
RNF139Q8WU17 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF139Q8WU17 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF139Q8WU17 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
RNF139Q8WU17 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF139Q8WU17 ABHD17AP1-201ENST00000358206 933 ntBASIC21.02■□□□□ 0.96
RNF139Q8WU17 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF139Q8WU17 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
RNF139Q8WU17 AC026366.1-201ENST00000488803 879 ntBASIC21.02■□□□□ 0.96
RNF139Q8WU17 AC023632.3-201ENST00000521633 145 ntBASIC21.02■□□□□ 0.96
RNF139Q8WU17 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF139Q8WU17 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF139Q8WU17 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF139Q8WU17 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF139Q8WU17 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF139Q8WU17 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF139Q8WU17 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF139Q8WU17 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF139Q8WU17 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.02■□□□□ 0.96
RNF139Q8WU17 DPP3P2-201ENST00000416030 1696 ntBASIC21.02■□□□□ 0.95
RNF139Q8WU17 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF139Q8WU17 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF139Q8WU17 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RNF139Q8WU17 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.02■□□□□ 0.95
RNF139Q8WU17 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF139Q8WU17 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF139Q8WU17 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF139Q8WU17 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.01■□□□□ 0.95
RNF139Q8WU17 UNC93B4-201ENST00000505679 747 ntBASIC21.01■□□□□ 0.95
RNF139Q8WU17 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF139Q8WU17 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF139Q8WU17 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF139Q8WU17 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF139Q8WU17 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF139Q8WU17 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF139Q8WU17 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF139Q8WU17 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
RNF139Q8WU17 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF139Q8WU17 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF139Q8WU17 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21■□□□□ 0.95
RNF139Q8WU17 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
RNF139Q8WU17 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21■□□□□ 0.95
RNF139Q8WU17 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF139Q8WU17 RER1-204ENST00000378518 522 ntTSL 3 BASIC21■□□□□ 0.95
RNF139Q8WU17 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RNF139Q8WU17 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21■□□□□ 0.95
RNF139Q8WU17 AC006557.6-201ENST00000623071 864 ntBASIC21■□□□□ 0.95
RNF139Q8WU17 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF139Q8WU17 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21■□□□□ 0.95
RNF139Q8WU17 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF139Q8WU17 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21■□□□□ 0.95
RNF139Q8WU17 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF139Q8WU17 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 HLA-G-202ENST00000376815 851 ntBASIC20.99■□□□□ 0.95
RNF139Q8WU17 HLA-G-203ENST00000376818 1127 ntBASIC20.99■□□□□ 0.95
RNF139Q8WU17 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms