Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRFBP1Q8NEF9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 AC142086.2-201ENST00000569753 217 ntBASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRFBP1Q8NEF9 KRT16P6-202ENST00000425692 1426 ntBASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 AC073130.3-201ENST00000624389 2278 ntBASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SRFBP1Q8NEF9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 ID1-201ENST00000376105 1233 ntBASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRFBP1Q8NEF9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.07■□□□□ 0.64
SRFBP1Q8NEF9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.06■□□□□ 0.64
SRFBP1Q8NEF9 BX119927.1-201ENST00000636596 1552 ntBASIC19.06■□□□□ 0.64
SRFBP1Q8NEF9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms